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perl-Bio-ASN1-EntrezGene

Perl module that implements a Parser for NCBI Entrez Gene

perl-Bio-ASN1-EntrezGene is a Perl module that implements regular expression-based Perl Parser for NCBI Entrez Gene.
Homepage:
Package version:1.09
Architecture:noarch
Distribution:Dag
Filename:perl-Bio-ASN1-EntrezGene-1.09-1.el5.rf.noarch.rpm

/usr/share/doc/perl-Bio-ASN1-EntrezGene-1.09/README

This is the README file for Bio::ASN1::EntrezGene package, which
includes:
1. XML parser-like parser for the ASN.1-formatted NCBI Entrez Gene files.
2. Indexer for Entrez Gene files.
3. XML parser-like parser for the ASN.1-formatted NCBI Sequence files.
4. Indexer for Sequence files.

These modules have quite high performance and error reporting capabilities.
Additionally, one could dump the data 
more»

/usr/share/doc/perl-Bio-ASN1-EntrezGene-1.09/README.1st

Please note that Bio::ASN1::EntrezGene package version 1.091 is exactly the
same as version 1.09 (the only difference being that this file only exists
in version 1.091).  The reason for releasing a version 1.091 is that CPAN
indexing of Bio::ASN1::EntrezGene version 1.09 had some problem that is not
yet fixed & I'd have to upload a package with different file name.

/usr/share/man/man3/Bio::ASN1::EntrezGene.3pm.gz

Bio::ASN1::EntrezUser(Contributed Perl DocumBio::ASN1::EntrezGene(3)



NAME
       Bio::ASN1::EntrezGene - Regular expression-based Perl Parser
       for NCBI Entrez Gene.

SYNOPSIS
         use Bio::ASN1::EntrezGene;

         my $parser = Bio::ASN1::EntrezGene->new('file' => "Homo_sapiens");
         while(my $result = $parser->next_seq)
         {
           # extract data from $result, or Du
more»

/usr/share/man/man3/Bio::ASN1::EntrezGene::Indexer.3pm.gz

Bio::ASN1::EntrezUser:Contributed PBio::ASN1::EntrezGene::Indexer(3)



NAME
       Bio::ASN1::Entre
more»

/usr/share/man/man3/Bio::ASN1::Sequence.3pm.gz

Bio::ASN1::SequenUser)Contributed Perl DocumenBio::ASN1::Sequence(3)



NAME
       Bio::ASN1::Seque
more»

/usr/share/man/man3/Bio::ASN1::Sequence::Indexer.3pm.gz

Bio::ASN1::SequenUserIContributed PerBio::ASN1::Sequence::Indexer(3)



NAME
       Bio::ASN1::Seque
more»

/usr/share/doc/perl-Bio-ASN1-EntrezGene-1.09/Changes

version 1.09: Added parser/indexer for NCBI's ASN.1-formatted
                sequence files (like G
more»

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