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biopython-1.59.tar.gz

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/biopython-1.59/README

**Biopython README file**
 
The Biopython Project is an international association of developers of freely
available Python tools for computational molecular biology.

Our website http://www.biopython.org provides an online resource for modules,
scripts, and web links for developers of Python-based software for life
science research.  This is hosted by the Open Bioinformatics Foundation or
O|B|F, h
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/biopython-1.59/Scripts/xbbtools/README

Tue Aug  8 23:23:15 2000

Xbbtools
========

Xbbtools is a Graphical Sequence Editor originally written in Tcl/Tk with
BioWish. This is the start of a pure python re-implementation of xbbtools with
biopython.
Usage: xbbtools test.fas

Whats available:
      * open FASTA file
      * display 1 or 6 frame translations ala DNA Strider
      * all operations work on selection or complete sequence
    
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/biopython-1.59/Tests/Blast/README.txt

BLAST TEST DATA FILES
=====================

This directory contains various data files for testing the
BLAST-related code in Biopython.

BLAST OUTPUT FILES (plain text)
-------------------------------

ID    PROGRAM  VER.   QUERY      DATABASE  PARAMETERS     DESCRIPTION
bt001 blastall 2.0.10 sp:P21297  swissprot -p blastp
bt002 blastall 2.0.10 sp:Q02112  pdbaa     -p blastp      no hits
bt003 bl
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/biopython-1.59/Tests/Fasta/README

FASTA TEST DATA FILES
=====================

This directory contains various data files for testing 
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/biopython-1.59/Tests/PAML/Control_files/README.txt

This folder contains the resources necessary to generate the PAML test result files.

/biopython-1.59/Tests/PopGen/README

The following test files are included

GenePop
-------
c2line.gen  - 2 chars per allele, one locus n
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/biopython-1.59/Tests/Roche/README.txt

Created with Roche tools from E3MFGYR02.sff, extracting 10 random reads:

* E3MFGYR02_random_10_read
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/biopython-1.59/Tests/SwissProt/README

SWISSPROT TEST DATA FILES
=========================

This directory contains various data files for 
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