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cd-hit-v4.6

Homepage:-
Package version:2012-04-25
Architecture:-
Distribution:Debian
Filename:cd-hit-v4.6-2012-04-25.tgz

/cd-hit-v4.6-2012-04-25/README

How to compile?
  1. Compile without multi-threading support: make
  2. Compile with multi-threading support: make openmp=yes

For more information, please read the cd-hit-users-guide.pdf. 

/cd-hit-v4.6-2012-04-25/ChangeLog

CD-HIT ChangeLog

CD-HIT-V4.6 (2011-04-25):
Add: better auto tuning (for -M 0) of word table size for both single and multiple threaded execution;
Fix: a minor bug for very long input sequences;
Add: compiling option to change MAX_SEQ.

CD-HIT-V4.5.8 (2011-03-24):
Add: handling of asterisk at the end of sequences;
Add: a few minor improvements in the parallelization;
Add: new options -mask and -b
more»

/cd-hit-v4.6-2012-04-25/license.txt

                    GNU GENERAL PUBLIC LICENSE
                       Version 2, June 1991

 Copyright (C) 1989, 1991 Free Software Foundation, Inc.,
 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA
 Everyone is permitted to copy and distribute verbatim copies
 of this license document, but changing it is not allowed.

                            Preamble

  The licenses for most softwa
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