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gmap_2010-07-21.orig.tar.gz

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Filename:gmap_2010-07-21.orig.tar.gz

/gmap-2010-07-21/README

0.  Availability
============

The source code for this package is available from
http://share.gene.com/gmap.  License terms are provided in the
COPYING file.


1.  Building and installing GMAP and GSNAP
==========================================

Prerequisites: a Unix system (including Cygwin on Windows), a C
compiler, and Perl

Step 1: Set your site-specific variables by editing the file
config
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/gmap-2010-07-21/ChangeLog

2010-07-21 08:17  twu

	* tests/setup1.test.in: Putting test chromosome in subdirectory

2010-07-21 08:17  twu

	* tests/setup2.test.in: Revised test for new gmapindex, but test
	  not being used currently

2010-07-21 08:13  twu

	* tests/iit.test.in: Not testing for diff in iittest.iit

2010-07-21 08:12  twu

	* tests/: align.test.ok, coords1.test.ok, map.test.ok: Changed
	  expectations to match
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/gmap-2010-07-21/AUTHORS

Thomas D. Wu and Colin K. Watanabe
Departments of Bioinformatics and Corporate Information Technology
Genentech, Inc.
1 DNA Way
South San Francisco, CA 94080
Contact: twu@gene.com


/gmap-2010-07-21/COPYING

Copyright (c) 2005 Genentech, Inc.  All rights reserved.

The Developers of this software are Thomas
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