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Java API to biological data and applications (version 1.7)

This package presents the Open Source Java API to biological databases and a series of mostly sequence-based algorithms. The APIs are not compatible between versions. In analogy to the dealing with shared libraries of the C language, the jar file of this package has the API version in its name. It is symbolically linked to the expected biojava.jar filename in the package libbiojava-java. This will help keeping multiple versions of the biojava API in parallel.
Package version:1:1.7.1-2


biojava for Debian

All the developers of BioJava are thanked for their fine work. Special
thanks go to Colin Hardman, Andreas Prlic, Simon Brocklehurst and Richard
Holland for reacting to my requests to add missing license information.

The package is not completely functional because of a dependency of
a very small fraction of code that is of little practical relevance to


biojava-live (1:1.7.1-2) unstable; urgency=low

  [ Jari Aalto ]
  * Remove quilt and upgrade to packaging format "3.0 quilt" which
    includes patch management built-in.
  * Update buildxml.patch to DEP-3 and run "quilt refresh" to make it
    apply cleanly.
  * Update to Standards-Version to 3.9.3 (no changes needed) and debhelper 9.
  * Update obsolete depends default-jdk-builddep to default-j


Upstream-Name: BioJava

Files: *
Copyright: 1999-2008 the Individual authors who contributed the code,
    as identified by the @authors tag of the respective source file.
    BioJava Developers <>
    Namely: Alan Li, Andreas Dräger <andreas.draeger@uni-tu

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