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Java API to biological data and applications (version 3)

This package presents the Open Source Java API to biological databases and a series of mostly sequence-based algorithms.

BioJava is an open-source project dedicated to providing a Java framework for processing biological data. It includes objects for manipulating sequences, file parsers, server support, access to BioSQL and Ensembl databases, and powerful analysis and statistical routines including a dynamic programming toolkit.

Package version:3.0.4-1


biojava for Debian

This package provide biojava libraries, made up of multiple libraries, dependent on biojava-core and other libraries.
To make use of thos libraries, the following libraries are needed in the classpath:
                        <fileset dir="/usr/share/java">
                                <include name="commons-cli.jar"/>


biojava3-live (3.0.4-1) unstable; urgency=low

  * Initial release (Closes: #674265)

 -- Olivier Sallou <>  Wed, 23 May 2012 18:13:46 +0200


Upstream-Name: biojava3

Files: biojava3-forester
Copyright: 2008-2009 Christian M. Zmasek
           2008-2009 Burnham Institute for Medical Research
License: LGPL-2.1+
 This package is free software; you can redistribute it and/or modify
 it under the terms of the GNU Lesser General Public License as published by
 the Free S

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