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libgo-perl

perl modules for GO and other OBO ontologies

Variants:
This is a collection of perl code for dealing with Gene Ontologies (GO) and Open Biomedical Ontologies (OBO) style ontologies. It is part of the `go-dev' distribution, but this Debian package is made from the CPAN archive. This package contains both scripts (which can be used with no knowledge of perl), and libraries which will be of use to perl programmers using GO or OBO.
Homepage:
Package version:0.09-1
Architecture:all
Distribution:Debian
Filename:libgo-perl_0.09-1_all.deb

/usr/share/doc/libgo-perl/README

go-perl modules
===============

This is a collection of perl code for dealing with GO and OBO style
ontologies. It is part of the go-dev distribution, but can be used
independently. The code contains both scripts (which can be used with
no knowledge of perl), and libraries which will be of use to perl
programmers using GO or OBO.

See the doc/ directory for more documentation

See also

  perldoc
more»

/usr/share/man/man1/go-apply-xslt.1p.gz

GO-APPLY-XSLT(1p)User Contributed Perl DocumentatioGO-APPLY-XSLT(1p)



NAME
       go-apply-xslt - apply GO XSL on OBO-XML

DESCRIPTION
       Will apply a GO XSL transform (by name) on an OBO-XML file

       For a full list of XSLs available, see
       <http://www.godatabase.org/xml/xsl>

SEE ALSO
       go-perl



perl v5.10.0                 2008-07-02            GO-APPLY-XSLT(1p)

/usr/share/man/man1/go-dag-summary.1p.gz

GO-DAG-SUMMARY(1pUser Contributed Perl DocumentatiGO-DAG-SUMMARY(1p)



NAME
       go-dag-summary - summarises an ontology

SYNOPSIS
         go-dag-summary ontology/gene_ontology.obo

DESCRIPTION
       Summarises an ontology

ARGUMENTS
       -e ERRFILE

       writes parse errors in XML - defaults to STDERR (there should
       be no parse errors in well formed files)

       -p FORMAT

      
more»

/usr/share/man/man1/go-export-graph.1p.gz

GO-EXPORT-GRAPH(1User Contributed Perl DocumentatGO-EXPORT-GRAPH(1p)



NAME
       go-export-graph.
more»

/usr/share/man/man1/go-export-prolog.1p.gz

GO-EXPORT-PROLOG(User Contributed Perl DocumentaGO-EXPORT-PROLOG(1p)



NAME
       go-export-prolog
more»

/usr/share/man/man1/go-filter-subset.1p.gz

GO-FILTER-SUBSET(User Contributed Perl DocumentaGO-FILTER-SUBSET(1p)



NAME
       go-filter-subset
more»

/usr/share/man/man1/go-show-assocs-by-node.1p.gz

GO-SHOW-ASSOCS-BYUserEContributed Perl DocGO-SHOW-ASSOCS-BY-NODE(1p)



NAME
       go-show-assocs-b
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/usr/share/man/man1/go-show-paths-to-root.1p.gz

GO-SHOW-PATHS-TO-User(Contributed Perl DocuGO-SHOW-PATHS-TO-ROOT(1p)



NAME
       go-show-paths-to
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