multiple alignment editor
JalView is a Java alignement editor that can work with sequence
alignement produced by programs implementing alignment algorithms
such as clustalw, kalign and t-coffee.
It has lots of features, is actively developed, and will compare
advantageously to BioEdit, while being free as in free speech !
The source is available as a tar file and comes complete with the GNU General Public License.
To build the application you will need a J2SDK 1.6+.
An Ant build file (build.xml) is provided, you will need to install Apache Ant first.
Run ant to view usage which will display a list of useful build targets.
Jalview is primarily developed with eclipse, and a .proj
jalview - Sequence alignement viewer
jalview provides facilities for viewing/editing and otherwise
manipulating sequence alignments (DNA, amino acids).
This program is a shell script wrapper based on java-wrap‐
jalview (2.7.dfsg-2) unstable; urgency=low
* Upload to unstable now that jmol is there too
* Pull patches/newer-jmol-api.diff from upstream's git repository to
make jalview work with jmol currently in unstable.
-- Vincent Fourmond <firstname.lastname@example.org> Mon, 07 Nov 2011 20:47:14 +0100
jalview (2.7.dfsg-1) experimental; urgency=low
* Initial release (Closes: #507436)
* Adding a deb
Browse inside jalview_2.7.dfsg-2_all.deb
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