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mozilla-biofox

extension of bioinformatics tools to Iceape and Iceweasel browsers

Code bioFOX aims at implementing various bioinformatics tools as an extension on the Iceape and Iceweasel browsers. Analysis of your favorite gene(s) usually require(s) retrieving it from a database like NCBI or Swiss-Prot and then performing one or more tasks including but not limited to:

* Translation of a nucleotide sequence; * Blast search (eg. blastn, blastp etc.) of the desired nucleotide/protein sequence; * Calculation of properties (like PI, charge, molecular weight, AT/GC content etc.) of a protein/nucleotide sequence; * Conversion between formats (Genbank, Fasta, Swiss-Prot etc.); * Prediction of sequence for sub-cellular localization (PREDOTAR, TargetP, pSORT etc).

Homepage:
Package version:1.6-1
Architecture:all
Distribution:Debian
Filename:mozilla-biofox_1.6-1_all.deb

/usr/share/doc/mozilla-biofox/README.Debian

biofox for Debian
---------------------------------

You need to restart your browser in order the changes take effect.
Also, Biofox is a sidebar.

To access it on Iceweasel, you can press Ctrl+Shift+F or go to
View, Sidebar, and choose bioFOX.
Ctrl+Shift+F may not work on some systems. This is a known issue and
upstream author is aware of it.

On Iceape, you can access bioFOX pressing F9 tho show
more»

/usr/share/doc/mozilla-biofox/changelog.Debian.gz

biofox (1.6-1) unstable; urgency=low

  [Charles Plessy]
  * debian/control:
    - Depend on xulrunner, and recommend iceweasel | iceape-browser.

  [Andreas Tille]
  * New upstream version
  * debian/control:
    - Standards-Version: 3.9.1 (no changes needed)
    - Fix spelling of Debian Med team
    - debhelper 7
    - Make use of mozilla-devscripts
  * debian/rules: Rewritten using mozilla-devs
more»

/usr/share/doc/mozilla-biofox/copyright

Format-Specification: http://wiki.debian.org/Proposals/CopyrightFormat?action=recall&rev=423
Upstream-Name: bioFOX
Upstream-Maintainer: Saleem Mohammed <saleem.m@gmail.com>
Upstream-Source: ftp://ftp.mozilla.org/pub/addons/

Files: *
Copyright: © 2005–2008 Saleem Mohammed <saleem.m@gmail.com>
License: MPL-1.1 | GPL-2+ | LGPL-2.1+
 The contents of this file are subject to the Mozilla Public Lice
more»

Browse inside mozilla-biofox_1.6-1_all.deb

         [DIR]DEBIAN/ (3)  65535+ mirrors
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         [DIR]usr/ (1)  65535+ mirrors

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