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reprof

protein secondary structure and accessibility predictor

'reprof' is an improved implementation of 'prof', a popular protein secondary structure and accessibility predictor. Prediction is either done from protein sequence alone or from an alignment - the latter should be used for optimal performance.

This package provides the 'reprof' command. It is only a command line interface to the functionality provided by the modules in librg-reprof-bundle-perl.

Homepage:
Package version:1.0.1-1
Architecture:all
Distribution:Debian
Filename:reprof_1.0.1-1_all.deb

/usr/share/man/man1/reprof.1.gz

REPROF(1)                   User Commands                  REPROF(1)



NAME
       reprof - predict protein secondary structure and solvent
       accessibility

SYNOPSIS
       reprof -i [query.blastPsiMat] [OPTIONS]

       reprof -i [query.fasta] [OPTIONS]

       reprof -i [query.blastPsiMat|query.fasta] --mutations
       [mutations.txt] [OPTIONS]

DESCRIPTION
       Predict protein secondar
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/usr/share/doc/reprof/changelog.Debian.gz

reprof (1.0.1-1) unstable; urgency=low

  * New upstream release

 -- Laszlo Kajan <lkajan@rostlab.org>  Fri, 13 Jan 2012 16:43:02 +0100

reprof (1.0.0-1) unstable; urgency=low

  * Initial release (Closes: #655336)

 -- Laszlo Kajan <lkajan@rostlab.org>  Fri, 16 Dec 2011 16:44:22 +0100

/usr/share/doc/reprof/changelog.gz

reprof (1.0.1) unstable; urgency=low

  * Moved implementation into RG::Reprof module, script now serves as a
    command line interface only.  Documented RG::Reprof module.

 -- Laszlo Kajan <lkajan@rostlab.org>  Fri, 13 Jan 2012 16:39:29 +0100

reprof (1.0.0) unstable; urgency=low

  * Initial version

 -- Peter Hoenigschmid <hoenigschmid@rostlab.org>  Wed, 04 Jan 2012 17:04:27 +0100

/usr/share/doc/reprof/copyright

This work was packaged for Debian by:

    Peter Hoenigschmid <hoenigschmid@rostlab.org> on Fri, 16 
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