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libzerg0

C library for parsing the output of NCBI BLAST programs

Variants:
Zerg is a C library for parsing the output of NCBI BLAST programs. Based on a GNU Flex-generated lexical scanner, it runs extremely fast, being especially useful for processing large volumes of data. Benchmark tests show that Zerg is over two orders of magnitude faster than some widely used BLAST parsers.

This package contains the shared library.

Homepage:
Package version:1.0.7-3
Architecture:amd64
Distribution:Debian
Filename:libzerg0_1.0.7-3_amd64.deb

/usr/share/doc/libzerg0/README

Introduction
============

This is the Zerg BLAST parsing library. It provides the
parsing engine used by the Perl module libzerg-perl.

Documentation
=============

Please refer to manpages Zerg and Zerg::Report in the module
libzerg-perl and to example programs in the package zerg-benchmarks.

Changes
=======

1.0.7 - 2009/01/27
 - Fixed YY_BUF_SIZE in Makefile. Should be 2*YY_READ_BUF_SIZE.
 - 
more»

/usr/share/doc/libzerg0/README.Debian

libzerg for Debian
------------------

Reference
=========

* Paquola, Apuã C M, Machado, Abimael A, Reis, Eduardo M, Da Silva, Aline M, and Verjovski-Almeida, Sergio: Zerg: a very fast BLAST parser library., Bioinformatics 19(8), volume 19, 1035–6, May 2003

 -- Laszlo Kajan <lkajan@rostlab.org>  Wed, 14 Sep 2011 15:29:37 +0200

/usr/share/doc/libzerg0/changelog.Debian.gz

libzerg (1.0.7-3) unstable; urgency=low

  [ Laszlo Kajan ]
  * Tille: debian/upstream-metadata.yaml: Added some missing fields
    Tue, 10 Jan 2012 08:30:18 +0100
  * Kajan: Renamed libzerg-dev to libzerg0-dev, Provides: libzerg-dev
  * Renamed libzerg-dbg to libzerg0-dbg.
  * dh build now, no more CDBS, with dh-autoreconf.
  * No more debian-changes patches.

  [ Andreas Tille ]
  * debian/patch
more»

/usr/share/doc/libzerg0/copyright

This work was packaged for Debian by:

    Laszlo Kajan <lkajan@rostlab.org> on Wed, 14 Sep 2011 15:
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