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phylip

[Biology] A package of programs for inferring phylogenies

Variants:
The PHYLogeny Inference Package is a package of programs for inferring phylogenies (evolutionary trees) from sequences. Methods that are available in the package include parsimony, distance matrix, and likelihood methods, including bootstrapping and consensus trees. Data types that can be handled include molecular sequences, gene frequencies, restriction sites, distance matrices, and 0/1 discrete characters.
Homepage:
Package version:1:3.67-3
Architecture:amd64
Distribution:Debian
Filename:phylip_3.67-3_amd64.deb

/usr/share/doc/phylip/README.Debian

phylip for DEBIAN
----------------------

Because Phylip is made of several different programs, some of
which having names which conflict with other Unix programs
(like "factor"), the Debian installation uses a wrapper, 
named "phylip", which is used to invoke the specific programs.

So, to run dnapenny, you type:

phylip dnapenny

If it bothers you, just add "/usr/lib/phylip/bin" in front of
your
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/usr/share/doc/phylip/examples/README

The 'infile' file contains DNA and is suitable for DNA-analysis
programs like dnapenny.


/usr/share/man/man1/phylip.1.gz

PHYLIP(1)                                                  PHYLIP(1)



NAME
       phylip - runs various phylogenies programs

SYNOPSIS
       phylip program [arguments]

DESCRIPTION
       This  manual page documents briefly the phylip wrapper to the
       Phylip programs.  This manual page was written for the Debian
       GNU/Linux  distribution  because the original program did not
       ha
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/usr/share/doc/phylip/changelog.Debian.gz

phylip (1:3.67-3) unstable; urgency=low

  [ Andreas Tille ]
  * Added XS-Autobuild: yes to enable a
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/usr/share/doc/phylip/copyright

This package was debianized by Andreas Tille <tille@debian.org> on
Tue, 30 Oct 2001 07:09:09 +0100


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