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fastdnaml

Tool for construction of phylogenetic trees of DNA sequences

Variants:
fastDNAml is a program derived from Joseph Felsenstein's version 3.3 DNAML (part of his PHYLIP package). Users should consult the documentation for DNAML before using this program.

fastDNAml is an attempt to solve the same problem as DNAML, but to do so faster and using less memory, so that larger trees and/or more bootstrap replicates become tractable. Much of fastDNAml is merely a recoding of the PHYLIP 3.3 DNAML program from PASCAL to C.

Note that the homepage of this program is not available any more and so this program will probably not see any further updates.

Homepage:
Package version:1.2.2-10
Architecture:amd64
Distribution:Debian
Filename:fastdnaml_1.2.2-10_amd64.deb

/usr/share/doc/fastdnaml/README.Debian

fastdnaml for DEBIAN
----------------------

Since fastDNAml comes with several different utilities,
which having names which may conflict with other Unix programs
the Debian installation uses a wrapper, named "fastDNAml-util", 
which is used to invoke the specific programs.

So, to run frequencies, you type:

fastDNAml-util frequencies

If it bothers you, just add "/usr/lib/fastdnaml/bin" in fron
more»

/usr/share/man/man1/fastDNAml.1.gz

fastDNAml(1)                                            fastDNAml(1)



NAME
       fastDNAml - DNA Maximum Likelihood program

SYNOPSIS
       fastDNAml < infile > outfile

       fastDNAml-util  utility

DESCRIPTION
       fastDNAml  is  derived  from Joseph Felsenstein's version 3.3
       DNAML.

       This manual page documents briefly the fastDNAml  and  fastDā€
       NAml-util  commands.
more»

/usr/share/doc/fastdnaml/changelog.Debian.gz

fastdnaml (1.2.2-10) unstable; urgency=low

  * debian/control:
    - Use ftp download site as homepage
    - Fixed Vcs fields
    - Standards-Version: 3.9.2 (no changes needed)
    - Do not Build-Depend cdbs, quilt any more
  * Debhelper 8 (control + compat)
  * debian/source/format: 3.0 (quilt)
  * removed debian/README.source which becomes superfluous by using
    source format 3.0 (quilt)
  * 
more»

/usr/share/doc/fastdnaml/copyright

This package was debianized by Andreas Tille <tille@debian.org> on
Mon, 29 Oct 2001 22:34:09 +0100.

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