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probcons

PROBabilistic CONSistency-based multiple sequence alignment

Variants:
Tool for generating multiple alignments of protein sequences. Using a combination of probabilistic modeling and consistency-based alignment techniques, PROBCONS has achieved the highest accuracies of all alignment methods to date. On the BAliBASE benchmark alignment database, alignments produced by PROBCONS show statistically significant improvement over current programs, containing an average of 7% more correctly aligned columns than those of T-Coffee, 11% more correctly aligned columns than those of CLUSTAL W, and 14% more correctly aligned columns than those of DIALIGN.
Homepage:
Package version:1.12-9
Architecture:amd64
Distribution:Debian
Filename:probcons_1.12-9_amd64.deb

/usr/share/doc/probcons/README.Debian

probcons for Debian
-------------------

* The "compare", "project" and "makegnuplot" programs are located in the
  probcons-extra package and renamed "pc-compare", "pc-project" and
  "pc-makegnuplot" to avoid collision with other program names.

* This package contains an additionnal binary which is not in the original
  distribution of ProbCons: probcons-RNA. It is an experimental version of
  P
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/usr/share/doc/probcons/README.gz

                          PROBCONS
                          ~~~~~~~~                          

   Probabilistic consistency-based multiple sequence alignment 

-----------------------------------------------------------------
                                                             
PROBCONS is a novel tool for generating  multiple  alignments
of protein sequences.  Using a combination  of 
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/usr/share/man/man1/probcons-RNA.1.gz

PROBCONS-RNA(1)            Probcons Manual           PROBCONS-RNA(1)



NAME
       probcons-RNA - An experimental version of ProbCons compiled
       with parameters estimated via unsupervised training on
       BRAliBASE.

DESCRIPTION
       See the manpage of probcons(1) for the command-line
       arguments, and /usr/share/doc/README.Debian for more
       informations about how probcons-RNA h
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/usr/share/man/man1/probcons.1.gz

PROBCONS(1)                Probcons Manual               PROBCONS(1)



NAME
       probcons - align
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/usr/share/doc/probcons/changelog.Debian.gz

probcons (1.12-9) unstable; urgency=low

  [ Charles Plessy ]
  * renamed debian/upstream-metadata.y
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/usr/share/doc/probcons/copyright

ProbCons was downloaded from http://probcons.stanford.edu/probcons_v1_10.tar.gz
The modified files f
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