Filewatcher File Search File Search
Catalog
Content Search
» » » » »

velvet

Nucleic acid sequence assembler for very short reads

Variants:
Velvet is a de novo genomic assembler specially designed for short read sequencing technologies, such as Solexa or 454, developed by Daniel Zerbino and Ewan Birney at the European Bioinformatics Institute (EMBL-EBI), near Cambridge, in the United Kingdom.

Velvet currently takes in short read sequences, removes errors then produces high quality unique contigs. It then uses paired read information, if available, to retrieve the repeated areas between contigs.

Homepage:
Package version:1.0.02~nozlibcopy-1
Architecture:amd64
Distribution:Debian
Filename:velvet_1.0.02~nozlibcopy-1_amd64.deb

/usr/share/doc/velvet/README.Debian

Velvet for Debian
-----------------

Third party scripts have been placed in ‘/usr/share/velvet/contrib’.

 -- Charles Plessy <plessy@debian.org>  Sat, 11 Jul 2009 18:06:40 +0900

/usr/share/doc/velvet/README.txt

README.TXT

VELVET SOURCE 
March 28 2008
Daniel Zerbino

NOTE: The PDF manual in this directory contains all the information contained
in this text file, plus much more!

> SUMMARY
	* A/ REQUIREMENTS
	* B/ COMPILING INSTRUCTIONS
	* C/ WHERE IS THE MANUAL?

----------------------------------------------------------------------------------
A/ REQUIREMENTS

	Velvet should function on any standard 64b
more»

/usr/share/velvet/contrib/AssemblyAssembler/README.txt

NAME
====

AssemblyAssembler.py

VERSION
=======

Version 1.1

LICENCE
=======

Copyright 2010 - Jacob Crawford - Cornell University.
	
jc598@cornell.edu

This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
    

more»

/usr/share/velvet/contrib/README.txt

contrib/ guide:

In this directory you will find software developed by various programmers which cou
more»

/usr/share/velvet/contrib/VelvetOptimiser-2.1.0/README

NAME
====

VelvetOptimiser

VERSION
=======

Version 2.1.0

LICENCE
=======

Copyright 2009 - Simon 
more»

/usr/share/velvet/contrib/layout/README.txt

Graph layout script by Paul Harrison (pfh@logarithmic.net)

1. Function:
	This script is a connector
more»

/usr/share/man/man1/velvetg.1.gz

VELVETG(1)                  User Commands                 VELVETG(1)



NAME
       velvetg  -  de  
more»

/usr/share/man/man1/velvetg_de.1.gz

VELVETG(1)                  User Commands                 VELVETG(1)



NAME
       velvetg  -  de  
more»

Browse inside velvet_1.0.02~nozlibcopy-1_amd64.deb

         [DIR]DEBIAN/ (2)  65535+ mirrors
         [DIR]usr/ (2)  65535+ mirrors

Download velvet_1.0.02~nozlibcopy-1_amd64.deb

Results 1 - 1 of 1
Help - FTP Sites List - Software Dir.
Search over 15 billion files
© 1997-2016 FileWatcher.com