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libhmsbeagle-dev

High-performance lib for Bayesian and Maximum Likelihood phylogenetics

Variants:
BEAGLE is a high-performance library that can perform the core calculations at the heart of most Bayesian and Maximum Likelihood phylogenetics packages. It can make use of highly-parallel processors such as those in graphics cards (GPUs) found in many PCs.

The project involves an open API and fast implementations of a library for evaluating phylogenetic likelihoods (continuous time Markov processes) of biomolecular sequence evolution.

The aim is to provide high performance evaluation 'services' to a wide range of phylogenetic software, both Bayesian samplers and Maximum Likelihood optimizers. This allows these packages to make use of implementations that make use of optimized hardware such as graphics processing units.

This package contains development files needed to build against Beagle library.

Homepage:
Package version:1.0-6
Architecture:i386
Distribution:Debian
Filename:libhmsbeagle-dev_1.0-6_i386.deb

/usr/share/doc/libhmsbeagle-dev/README.Debian

libhmsbeagle for Debian
-----------------------

This is compiled from SVN.  Used the internal name 'libhmsbeagle' to
differentiate from the other 'beagle'.

For more information you might like to read

   http://tree.bio.ed.ac.uk/publications/390/


 -- Tim Booth <tbooth@ceh.ac.uk>  Thu, 08 Dec 2011 17:05:04 +0000

/usr/share/man/man3/BeagleInstanceDetails.3.gz

BeagleInstanceDetails(3)      HMSBEAGLE     BeagleInstanceDetails(3)



NAME
       BeagleInstanceDetails - Information about a specific
       instance.


SYNOPSIS
       #include <libhmsbeagle/beagle.h>

   Public Attributes
       int resourceNumber
       char * resourceName
       char * implName
       char * implDescription
       long flags

Detailed Description
       Information about a 
more»

/usr/share/man/man3/BeagleOperation.3.gz

BeagleOperation(3)            HMSBEAGLE           BeagleOperation(3)



NAME
       BeagleOperation -

SYNOPSIS
   Public Attributes
       int destinationPartials
       int destinationScaleWrite
       int destinationScaleRead
       int child1Partials
       int child1TransitionMatrix
       int child2Partials
       int child2TransitionMatrix


Author
       Generated automatically by Doxygen 
more»

/usr/share/man/man3/BeagleResource.3.gz

BeagleResource(3)             HMSBEAGLE            BeagleResource(3)



NAME
       BeagleResource -
more»

/usr/share/man/man3/BeagleResourceList.3.gz

BeagleResourceList(3)         HMSBEAGLE        BeagleResourceList(3)



NAME
       BeagleResourceLi
more»

/usr/share/man/man3/Dim3Int.3.gz

Dim3Int(3)                    HMSBEAGLE                   Dim3Int(3)



NAME
       Dim3Int -

SYNOP
more»

/usr/share/man/man3/FourTaxonExample.3.gz

FourTaxonExample(3)           HMSBEAGLE          FourTaxonExample(3)



NAME
       FourTaxonExample
more»

/usr/share/man/man3/GPUInterface.3.gz

GPUInterface(3)               HMSBEAGLE              GPUInterface(3)



NAME
       GPUInterface -


more»

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