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'disulfinder' predicts disulfide patterns in two computational stages: (1) the disulfide bonding state of each cysteine is predicted by a BRNN-SVM binary classifier; (2) cysteines that are known to participate in the formation of bridges are paired by a Recursive Neural Network to obtain a connectivity pattern.
| Homepage: | http://disulfind.dsi.unifi.it/ |
| Package version: | 1.2.11-2+b1 |
| Architecture: | i386 |
| Distribution: | Debian |
| Filename: | disulfinder_1.2.11-2+b1_i386.deb |
Disulfinder =========== References ---------- * A. Ceroni, A. Passerini, A. Vullo and P. Frasconi. DISULFIND: a Disulfide Bonding State and Cysteine Connectivity Prediction Server, Nucleic Acids Research, 34(Web Server issue):W177-W181, 2006. For the disulphide connectivity predictor see: * A. Vullo and P. Frasconi. Disulfide Connectivity Prediction using Recursive Neural Networks and Evo more»
DISULFINDER(1) User Commands DISULFINDER(1)
NAME
disulfinder - cysteines disulfide bonding state and
connectivity predictor
SYNOPSIS
disulfinder [OPTIONS]
DESCRIPTION
'disulfinder' is for predicting the disulfide bonding state
of cysteines and their disulfide connectivity starting from
sequence alone. Disulfide bridges play a
more»disulfinder (1.2.11-2+b1) sid; urgency=low
* Binary-only non-maintainer upload for i386; no source changes.
* Rebuild against boost1.49
-- i386 Build Daemon <buildd_i386-biber@buildd.debian.org> Sat, 07 Apr 2012 08:58:54 +0000
disulfinder (1.2.11-2) unstable; urgency=low
* added mkdir debian/disulfinder-data/usr/share/disulfinder/ to
debian/rules before moving Models to disulfinder
more»disulfinder (1.2.11) unstable; urgency=low * examples now installed into $(docdir)/examples -- more»
This package was debianized by Laszlo Kajan <lkajan@rostlab.org> on Fri, 30 Oct 2009 12:12:21 +0100. more»
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