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EMBOSS Libraries

This package contains the core libraries of the European Molecular Biology Open Software Suite, EMBOSS.

AJAX covers standard data structures, including strings, sequences, file handles, queues, hashes, heaps, lists, dictionaries, trees and dynamic arrays. It also covers standard algorithms including comparisons, pattern matching, sorting, and iterators. AJAX will also provide a set of high level graphics functions suited to the needs of sequence analysis applications.

The NUCLEUS library provides higher-level functions specific to molecular sequence analysis, including sequence comparisons, translation, codon usage and annotation.

It also contains a eplplot, an EMBOSS, a fork of the plplot library.

In Debian, these libraries are to be considered private.

Package version:6.4.0-4


emboss (6.4.0-4) unstable; urgency=low

  * use autoreconf to enable latest changes

 -- Andreas Tille <>  Fri, 10 Aug 2012 22:46:33 +0200

emboss (6.4.0-3) unstable; urgency=low

  * Import patches prepared by Felix Geyer <> to cope
    with the --as-needed issue when linking against database clients
    (thanks to Felix)
    Closes: #650237
  * Fix typo to build 


	Version 6.4.0 15-Jul-2011

	DBXFLAT can index FASTQ format short
	read sequence files, allowing individual sequences to be rapidly
	retrieved by name.

	Genpept format has changed since we last tested it. The LOCUS line
	is simpler. EMBOSS now supports GenPept as documented and
	distributed by NCBI.

	Sequence in SAM format ignores the reference sequence
	name. Previous releases saved it as the a



Files: *
Copyright: The EMBOSS developers or their employers.
License: emboss
 EMBOSS License (
 The AJAX and NUCLEUS libraries are released under the GNU Library General
 Public Licence.
 The EMBOSS Administrator´┐Ż´┐Ż

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