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probcons-extra

Extra programs from the probcons package

Variants:
Contains the convert, project and makgnuplot programs from the probcons package, which have been renamed to pc-compare, pc-project and pc-makegnuplot respectively to avoid collisions with other program names. These programs are mostly useful for testing purposes and are not required for the normal usage of Probcons.

Probcons is a tool for generating multiple alignments of protein sequences.

Homepage:
Package version:1.12-4
Architecture:i386
Distribution:Debian
Filename:probcons-extra_1.12-4_i386.deb

/usr/share/man/man1/pc-compare.1.gz

PC-COMPARE(1)              Probcons Manual             PC-COMPARE(1)



NAME
       pc-compare - Program for scoring alignments according to a
       reference alignment with respect to sum-of-pairs and column
       scores.

SYNOPSIS
       pc-compare [TEST_ALIGNMENT] [REFERENCE_ALIGNMENT]
                  [BALIBASE_ANNOT_FILE] [-col] [-core] [-caps]
                  [-annot FILENAME]

NOTE
   
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/usr/share/man/man1/pc-makegnuplot.1.gz

PC-MAKEGNUPLOT(1)          Probcons Manual         PC-MAKEGNUPLOT(1)



NAME
       pc-makegnuplot - Utility to plot annotation scores.

SYNOPSIS
       pc-makegnuplot [annotscores] [-refscores]

NOTE
       pc-makegnuplot is named makegnuplot in the original sources,
       but has been remamed to avoid collision with other program
       names.

SEE ALSO
       pc-compare(1), pc-project(1),from 
more»

/usr/share/man/man1/pc-project.1.gz

PC-PROJECT(1)              Probcons Manual             PC-PROJECT(1)



NAME
       pc-project - Program to project multiple alignment to
       pairwise alignments.

SYNOPSIS
       pc-project [ALIGNMENT] [-nocompressgaps]

NOTE
       pc-project is named project in the original sources, but has
       been remamed to avoid collision with other program names.

SEE ALSO
       pc-makegnufile(1), p
more»

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