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proda

multiple alignment of protein sequences

Variants:
ProDA is a system for automated detection and alignment of homologous regions in collections of proteins with arbitrary domain architectures. Given an input set of unaligned sequences, ProDA identifies all homologous regions appearing in one or more sequences, and returns a collection of local multiple alignments for these regions.
Homepage:
Package version:1.0-8
Architecture:i386
Distribution:Debian
Filename:proda_1.0-8_i386.deb

/usr/share/man/man1/proda.1.gz

PRODA(1)                                                    PRODA(1)



NAME
       proda - multiple alignment of protein sequences with repeats
       and rearrangements

SYNOPSIS
       proda [option] [mfafile] [> output]

DESCRIPTION
       This manual page documents briefly the proda command.

       proda (Protein Domain Aligner) is public domain software for
       generating multiple alignm
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/usr/share/doc/proda/changelog.Debian.gz

proda (1.0-8) unstable; urgency=low

  [ Charles Plessy ]
  * Documented information in ‘debian/upstream’.
  * Removed mention of the bibliographic reference in ‘debian/control’.

  [ Andreas Tille ]
  * debian/control:
     - Replaced David Paleino as Uploader by myself because David seems
       to have dropped his name from all Debian Med packages
     - Standards-Version: 3.9.3 (no cha
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/usr/share/doc/proda/copyright

Format-Specification: http://wiki.debian.org/Proposals/CopyrightFormat
Upstream-Author: Phuong Tu Minh <phuongtm@fpt.com.vn>
 Do Chuong B. <chuongdo@cs.stanford.edu>
 Edgar Robert C. <bob@drive5.com>
 Batzoglou Serafim <serafim@cs.stanford.edu>
Original-Source-Location: http://proda.stanford.edu/proda_1_0.tar.gz
Packaged-By: David Paleino <d.paleino@gmail.com>
Packaged-Date: Tue, 24 Apr 2007 12:47
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