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An In-silico PCR Experiment Simulation System (see the ipcress man page) is packaged with exonerate.
This package also comes with a selection of utilities for performing simple manipulations quickly on fasta files beyond 2Gb
Homepage: | http://www.ebi.ac.uk/~guy/exonerate/ |
Package version: | 2.2.0-6 |
Architecture: | ia64 |
Distribution: | Debian |
Filename: | exonerate_2.2.0-6_ia64.deb |
exonerate for Debian -------------------- Charles has fixed the man pages for this package - many thanks to him. The upstream author, Guy Slater, is very supportive of Debian. He even gave brief instructions on how to build a package in his README. This is much appreciated. Guy was contacted asking for a clarification of the version of the GPL he refers to and to avoid the web link in the C so more»
README file for exonerate package. FAQs ----------------------------------------------------------------- General ======= What does this package contain ? ------------------------------ This package contains exonerate and its libraries. Exonerate is a general purpose tool for biological sequence comparison. The libraries are provided with the intention of providing general uti more»
exonerate-server(1) sequence comparison server exonerate-server(1) NAME exonerate-server - a sequence comparison server for exonerate SYNOPSIS exonerate-server [ options ] <index path> DESCRIPTION exonerate-server is a multi-threaded server for the exonerate sequence alignment program. It uses a set of sequences and a corresponding index file to more»
exonerate(1) sequence comparison tool exonerate(1) NAME exonerate - a ge more»
EXONERATE(1) EXONERATE(1) NAME exonerate - suit more»
fastautils(1) FASTA format file manipulation utilities fastautils(1) NAME fastautils - FAS more»
ipcress(1) PCR simulation tool ipcress(1) NAME ipcress - In-sil more»
exonerate (2.2.0-6) unstable; urgency=low * debian/patches/autoreconf.patch: Removed because not more»
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