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emboss

european molecular biology open software suite

Variants:
EMBOSS is a free Open Source software analysis package specially developed for the needs of the molecular biology (e.g. EMBnet) user community. The software automatically copes with data in a variety of formats and even allows transparent retrieval of sequence data from the web. Also, as extensive libraries are provided with the package, it is a platform to allow other scientists to develop and release software in true open source spirit. EMBOSS also integrates a range of currently available packages and tools for sequence analysis into a seamless whole. EMBOSS breaks the historical trend towards commercial software packages.
Homepage:
Package version:6.4.0-2
Architecture:mipsel
Distribution:Debian
Filename:emboss_6.4.0-2_mipsel.deb

/usr/share/doc/emboss/README.Debian

EMBOSS for Debian
=================

Some programs renamed
---------------------

Some programs in EMBOSS have a name which is also used by other programs from
other packages. The Debian distribution does not allow two packages to conflict
in this way. Therfore 'cons' has been renamed 'em_cons' and 'pscan has been
renamed 'em_pscan'.

There is a directory in which the program names are guaranteed 
more»

/usr/share/man/man1/newseq.1e.gz

NEWSEQ(1e)            EMBOSS Manual for Debian            NEWSEQ(1e)



NAME
       newseq - Create a sequence file from a typed-in sequence

SYNOPSIS
       newseq -name string -description string -type list
              -sequence string -outseq seqout

       newseq -help

DESCRIPTION
       newseq is a command line program from EMBOSS (“the European
       Molecular Biology Open Software Sui
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/usr/share/doc/emboss/NEWS.gz

15/07/2011	Version 6.4.0  See ChangeLog
19/07/2010	Version 6.3.1  Fix Ubuntu compilation problem
15/07/2010	Version 6.3.0  See ChangeLog
15/01/2010	Version 6.2.0  See ChangeLog
15/07/2009	Version 6.1.0  See ChangeLog
16/07/2008	Version 6.0.1  See ChangeLog
15/07/2008	Version 6.0.0  See ChangeLog
15/07/2007	Version 5.0.0  See ChangeLog
04/03/2007	Version 4.1.0  See ChangeLog
15/07/2006	Version 4.0.
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/usr/share/doc/emboss/FAQ.gz

The EMBOSS Frequently Asked Questions list
==========================================

Last modified
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/usr/share/man/man1/aaindexextract.1e.gz

AAINDEXEXTRACT(1e)    EMBOSS Manual for Debian    AAINDEXEXTRACT(1e)



NAME
       aaindexextract -
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/usr/share/man/man1/abiview.1e.gz

ABIVIEW(1e)           EMBOSS Manual for Debian           ABIVIEW(1e)



NAME
       abiview - Displa
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/usr/share/man/man1/acdc.1e.gz

ACDC(1e)              EMBOSS Manual for Debian              ACDC(1e)



NAME
       acdc - Test an a
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/usr/share/man/man1/acdlog.1e.gz

ACDLOG(1e)            EMBOSS Manual for Debian            ACDLOG(1e)



NAME
       acdlog - Test ap
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