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bppsuite

Bio++ program suite

Variants:

Includes programs: - BppML for maximum likelihood analysis, - BppSeqGen for sequences simulation, - BppAncestor for ancestral states reconstruction, - BppDist for distance methods, - BppPars for parsimony analysis, - BppSeqMan for file conversion and sequence manipulation, - BppConsense for building consensus tree and computing bootstrap values, - BppPhySamp for phylogenetic sampling, - BppReRoot for tree rerooting. - BppTreeDraw for tree drawing. - BppAlnScore for comparing alignments and computing alignment scores.

Homepage:	-
Package version:	0.7.0-1
Architecture:	s390x
Distribution:	Debian
Filename:	bppsuite_0.7.0-1_s390x.deb

/usr/share/man/man1/bppalnscore.1.gz

BPPALNSCORE(1)                                        BPPALNSCORE(1)



NAME
       bppalnscore - Bio++ alignment scoring


SYNOPSIS
       bppalnscore [options]


AVAILABILITY
       All UNIX flavors


DESCRIPTION
       bppalnscore  compares two alignment and compute corresponding
       column scores.  Scores can be output to a text  file,  and/or
       used  to  generate  a  site  selection t
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/usr/share/man/man1/bppancestor.1.gz

BPPANCESTOR(1)                                        BPPANCESTOR(1)



NAME
       bppml - Ancestral sequence reconstruction with Bio++


SYNOPSIS
       bppancestor [options]


AVAILABILITY
       All UNIX flavors


DESCRIPTION
       bppancestor performs ancestral sequence reconstructions under
       a large variety of models, including non-homogeneous ones.


OPTIONS
       You should refer t
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/usr/share/man/man1/bppconsense.1.gz

BPPCONSENSE(1)                                        BPPCONSENSE(1)



NAME
       bppconsense - Tree consensus analysis with Bio++


SYNOPSIS
       bppconsense [options]


AVAILABILITY
       All UNIX flavors


DESCRIPTION
       bppconsense  performs  tree  consensus  construction  under a
       large variety of rules.


OPTIONS
       You should refer to 'info bppsuite' or to the  online  ma
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/usr/share/man/man1/bppdist.1.gz

BPPDIST(1)                                                BPPDIST(1)



NAME
       bppdist  -  Dist
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/usr/share/man/man1/bppml.1.gz

BPPML(1)                                                    BPPML(1)



NAME
       bppml - Maximum 
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/usr/share/man/man1/bpppars.1.gz

BPPPARS(1)                                                BPPPARS(1)



NAME
       bpppars - Parsim
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/usr/share/man/man1/bppphysamp.1.gz

BPPPHYSAMP(1)                                          BPPPHYSAMP(1)



NAME
       bppphysamp - Phy
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/usr/share/man/man1/bppreroot.1.gz

BPPREROOT(1)                                            BPPREROOT(1)



NAME
       bppreroot - Sequ
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