Filewatcher File Search File Search
Catalog
Content Search
» » » » »

dialign-tx

Segment-based multiple sequence alignment

Variants:
DIALIGN-TX is a command line tool to perform multiple alignment of protein or DNA sequences. It is a complete reimplementation of the segment-base approach including several new improvements and heuristics that significantly enhance the quality of the output alignments compared to DIALIGN 2.2 and DIALIGN-T. For pairwise alignment, DIALIGN-TX uses a fragment-chaining algorithm that favours chains of low-scoring local alignments over isolated high-scoring fragments. For multiple alignment, DIALIGN-TX uses an improved greedy procedure that is less sensitive to spurious local sequence similarities.
Homepage:
Package version:1.0.2-2
Architecture:s390x
Distribution:Debian
Filename:dialign-tx_1.0.2-2_s390x.deb

/usr/share/doc/dialign-tx/README.Debian

DIALIGN-TX for Debian
--------------------

The configuration directory shipped with the source is installed in
/usr/share/dialign-tx on your system.


Possible issues with this package:

 - Users have no write acces to /usr/share/dialign-tx, so problems are expected
   when running dialign-t -C.

 -- Charles Plessy <plessy@debian.org>  Fri, 04 Apr 2008 11:23:25 +0900

/usr/share/man/man1/dialign-tx.1.gz

DIALIGN-TX(1)          DIALIGN-TX: Parameters          DIALIGN-TX(1)



NAME
       dialign-tx - Segment-based multiple sequence alignment

SYNOPSIS
       dialign-tx [OPTIONS] {conf-directory} {fasta-file}
                  [fasta-out-file]

DESCRIPTION
       DIALIGN-TX is an improved algorithm for segment-based
       multiple protein alignments. DIALIGN-TX is a complete
       reimplementation
more»

/usr/share/doc/dialign-tx/changelog.Debian.gz

dialign-t (1.0.2-2) unstable; urgency=low

  [ Charles Plessy ]
  * Documented information in ‘debian/upstream-metadata.yaml’.
  * Removed mention of the bibliographic reference in ‘debian/control’.

  [ Andreas Tille ]
  * Added myself to uploaders
  * Standards-Version: 3.9.1 (no changes needed)
  * debian/source/format: 3.0 (quilt)

 -- Andreas Tille <tille@debian.org>  Fri, 14 Jan 2011
more»

/usr/share/doc/dialign-tx/copyright

Format-Specification: http://wiki.debian.org/Proposals/CopyrightFormat?action=recall&rev=129
Upstrea
more»

Browse inside dialign-tx_1.0.2-2_s390x.deb

         [DIR]DEBIAN/ (2)  65535+ mirrors
         [DIR]usr/ (2)  65535+ mirrors

Download dialign-tx_1.0.2-2_s390x.deb

Results 1 - 1 of 1
Help - FTP Sites List - Software Dir.
Search over 15 billion files
© 1997-2016 FileWatcher.com