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dotur

distance based OTU and richness estimation

Variants:
DOTUR is a computer program that takes a distance matrix describing the genetic distance between DNA sequence data and assigns sequences to operational taxonomic units (OTUs) using either the furthest, average, or nearest neighbor algorithms for all possible distances that can be described using the distance matrix. Using the OTU composition data, DOTUR constructs collector's and rarefaction curves for sampling intensity, richness estimators, and diversity indices.
Homepage:
Package version:1.53-2
Architecture:s390x
Distribution:Debian
Filename:dotur_1.53-2_s390x.deb

/usr/share/doc/dotur/README

// 
// DOTUR: A program for calculating discriptive statistics for sequence libraries.
// Version 1.3, released on March 3, 2005
// Copyright (C) 2005 Patrick D. Schloss 
//
// This program is free software; you can redistribute it and/or modify
// it under the terms of the GNU General Public License as published by
// the Free Software Foundation; either version 2 of the License, or
// (at your o
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/usr/share/man/man1/dotur.1.gz

Dotur(1)                                                    Dotur(1)



NAME
       dotur  - A program for calculating descriptive statistics for
       sequence libraries


SYNOPSIS
       dotur [-i Iterations (<1000>)] [-c ClusterMethod (<f>, n, a)]
       [-p Precision (10, <100>, 1000, 10000)] [-l] [-j] <file>

OPTIONS
       -i:    Number of iterations (default = 1000)

       -c:    Clusteri
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/usr/share/doc/dotur/changelog.Debian.gz

dotur (1.53-2) unstable; urgency=low

  [ A. Costa ]
  * Corrected typo in dotur.1 manual page (Closes: #650470).

  [ Thorsten Alteholz ]
  * debian/rules: target get-orig-source added
  * debian/watch: new upstream url added

 -- Thorsten Alteholz <debian@alteholz.de>  Mon, 05 Dec 2011 18:00:00 +0100

dotur (1.53-1) unstable; urgency=low

  * Initial release (Closes: #629439)

 -- Thorsten Alteh
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/usr/share/doc/dotur/changelog.gz

Version 1.0
   Released May 25, 2004
Version 1.1
   Released July 19, 2004
     Fixed bug in shannon
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/usr/share/doc/dotur/copyright

Format: http://dep.debian.net/deps/dep5
Upstream-Name: dotur
Source: http://www.plantpath.wisc.edu/f
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