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bowtie

An ultrafast, memory-efficient short read aligner

Bowtie, an ultrafast, memory-efficient short read aligner for short DNA sequences (reads) from next-gen sequencers. Please cite: Langmead B, et al. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol 10:R25.
Homepage:
Package version:0.12.7
Architecture:x86_64
Distribution:Fedora
Filename:bowtie-0.12.7-4.fc17.x86_64.rpm

/usr/share/doc/bowtie-0.12.7/doc/README

To populate this directory, change to the bowtie directory and type
'make doc'.  You must have pandoc installed:

  http://johnmacfarlane.net/pandoc/

/usr/share/doc/bowtie-0.12.7/NEWS

Bowtie: an Ultrafast, Lightweight Short Read Aligner

Bowtie NEWS
===========

   Bowtie is now available for download.  0.9.0 is the first version to
be released under the OSI Artistic License (see `COPYING') and freely
available to the public for download.  The current version is 0.12.7.

Reporting Issues
================

Please report any issues using the Sourceforge bug tracker:

  https://so
more»

/usr/share/doc/bowtie-0.12.7/AUTHORS

Bowtie authors
Primary contact <blangmea@jhsph.edu>

Ben Langmead and Cole Trapnell wrote Bowtie.  The SeqAn-1.1 library is
used in Bowtie and some of its sources are included in Bowtie source
releases; its authors are Andreas Doring, David Weese, Tobias Rausch,
and Knut Reinert.  A DLL from the pthreads for Win32 library is
distributed with the Win32 version of Bowtie.  The pthreads for Win32
lib
more»

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