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Bio-Graphics-2.24.tar.gz

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Filename:Bio-Graphics-2.24.tar.gz

/Bio-Graphics-2.24/README

Bio::Graphics - Generate GD images of Bio::Seq objects

SYNOPSIS

This is a simple GD-based renderer (diagram drawer) for DNA and
protein sequences.  It is used from Perl like this:

  use Bio::Graphics;
  use Bio::DB::BioFetch;  # or some other Bio::SeqI generator
  # get a Bio::SeqI object somehow
  my $bf     = Bio::DB::BioFetch->new;
  my $cosmid = $bf->getSeq_by_id('CEF58D5');

  my @features
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/Bio-Graphics-2.24/README.bioperl

Bio::Graphics requires BioPerl version 1.6 ($VERSION 1.006 or higher),
which is expected to be released by the end of 2008. Until then, you
should use the version of Bio::Graphics that is in the current (1.5 or
lower) version of BioPerl.


/Bio-Graphics-2.24/Changes

Revision history for Perl extension Bio::Graphics.

2.24
    - In feature file configuration sections, allow a tag to contain ":".
  
2.23
    - Workaround a problem in BioPerl 1.069 which prevents FeatureFile from rendering
      properly. Fixed in 1.06902 and higher.
    - Fix issue which caused the track bgcolor property to be ignored in some cases.

2.22
     - Changed package "Math" to "Bio::
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