Filewatcher File Search File Search
Catalog
Content Search
» » » » »

Bio-SamTools-1.11.tar.gz

Homepage:-
Package version:-
Architecture:-
Distribution:Perl-CPAN
Filename:Bio-SamTools-1.11.tar.gz

/Bio-SamTools-1.11/README

This is a Perl interface to the SAMtools sequence alignment interface.
See http://samtools.sourceforge.net/.

To compile this module, you must first download, unpack and compile
SAMtools 0.1.4 or higher in some accessible directory. FOR SAMTOOLS
VERSION 0.1.4, YOU MUST RUN "make -f makefile.generic" IN THE
DISTRIBUTION DIRECTORY IN ORDER TO CREATE THE REQUIRED libbam.a
LIBRARY FILE. For other vers
more»

/Bio-SamTools-1.11/Changes

Version 1.11
    * Fixed the padded alignments returned for hard-clipped alignments.

Version 1.10
    * Added a new Bio::DB::Bam method for caching remote files' indices in the
      temp directory. This is used by default by high-level API.
    * Fixed bug in soft and hard clipping code; query endpoints should be
      correct now.
    * Fixed bug in get_all_tags() which was choking on "Z" style
more»

/Bio-SamTools-1.11/LICENSE

a) the GNU General Public License as published by the Free
   Software Foundation; either version 1, or (at your option) any
   later version, or
b) the "Artistic License 2.0"

----------------------------------------------------------------------------

The General Public License (GPL)
Version 2, June 1991

Copyright (C) 1989, 1991 Free Software Foundation, Inc. 675 Mass Ave,
Cambridge, MA 02139,
more»

Browse inside Bio-SamTools-1.11.tar.gz

         [DIR]Bio-SamTools-1.11/ (10)

Download Bio-SamTools-1.11.tar.gz

Results 1 - 1 of 1
Help - FTP Sites List - Software Dir.
Search over 15 billion files
© 1997-2016 FileWatcher.com