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Bio-SFF-0.005.tar.gz

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Filename:Bio-SFF-0.005.tar.gz

/Bio-SFF-0.005/README


This archive contains the distribution Bio-SFF,
version 0.005:

  Standard Flowgram Format for Perl

This software is copyright (c) 2011 by Leon Timmermans, Utrecht University.

This is free software; you can redistribute it and/or modify it under
the same terms as the Perl 5 programming language system itself.



/Bio-SFF-0.005/corpus/README.txt

The files in this directory were taken from BioPython, the origals can be
found at https://github.com/biopython/biopython/tree/master/Tests/Roche.

Created with Roche tools from E3MFGYR02.sff, extracting 10 random reads:

* E3MFGYR02_random_10_reads.sff - has an .mft1.00 style index and manifest
* E3MFGYR02_random_10_reads.fasta
* E3MFGYR02_random_10_reads.qual
* E3MFGYR02_random_10_reads_no_trim.
more»

/Bio-SFF-0.005/t/release-kwalitee.t

#!perl

BEGIN {
  unless ($ENV{RELEASE_TESTING}) {
    require Test::More;
    Test::More::plan(skip_all => 'these tests are for release candidate testing');
  }
}


# This test is generated by Dist::Zilla::Plugin::Test::Kwalitee
use strict;
use warnings;
use Test::More;   # needed to provide plan.
eval {
  require Test::Kwalitee;
  Test::Kwalitee->import( tests => [ qw( -use_strict ) ]);
};

plan
more»

/Bio-SFF-0.005/t/release-pod-coverage.t

#!perl

BEGIN {
  unless ($ENV{RELEASE_TESTING}) {
    require Test::More;
    Test::More::plan(skip
more»

/Bio-SFF-0.005/t/release-pod-syntax.t

#!perl

BEGIN {
  unless ($ENV{RELEASE_TESTING}) {
    require Test::More;
    Test::More::plan(skip
more»

/Bio-SFF-0.005/Changes

Revision history for Bio-SFF

0.005     2012-04-13 12:05:11 Europe/Amsterdam
          use FileHandl
more»

/Bio-SFF-0.005/LICENSE

This software is copyright (c) 2011 by Leon Timmermans, Utrecht University.

This is free software; 
more»

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